Article Pmid Ome Technology Species Experimental_Design Topics Tissues Sex Dev_Stage Antibody Mutant Cell_Sorted Keywords Select
Ancelin et al. 2016, Elife 26836306 Transcriptome RNA-Seq Mus musculus Mutant Oogenesis,
Development,
Embryogenesis
Oocytes,
Embryo
Female Fetal Lsd1/Kdm1a wt/wt,
Lsd1/Kdm1a flox/flox,
Lsd1/Kdm1a mko/mko,
Lsd1/Kdm1a flox/wt,
Lsd1 mat ko/wt
chromosomes,
developmental biology,
epigenetic reprogramming,
genes,
histone demethylation,
lysine methylation,
mouse,
preimplantation development,
retrotransposons,
stem cells,
transcription regulation
Ayers et al. 2015, BMC Genomics 26377738 Transcriptome RNA-Seq Gallus gallus Normal Development Embryo,
Ovary,
Testis
Female,
Male
Fetal Sex determination,
Gonad,
Sexual differentiation,
Chicken embryo,
Ovary,
Testis,
RNA-seq
Bao et al. 2015, Development 25503407 Transcriptome RNA-Seq Mus musculus Mutant Gonad somatic cells Testis Male Prepubertal UPF2-/-,
wild-type
Nonsense-mediated mRNA decay,
Premature termination codon,
Alternative splicing,
Sertoli cell,
3?UTR,
shortening,
Testis,
Gonocyte,
Spermatogenesis,
Sterility,
RNA-Seq,
Mouse
Bao et al. 2016, PLoS Genet. 27149259 Transcriptome RNA-Seq Mus musculus Mutant Spermatogenesis Testis,
Round spermatids,
Pachytene spermatocytes
Male Adult UPF2-/-,
wild-type
Ben Maamar et al. 2018, Environ Epigenet 29732173 Epigenome ChIP-Seq Rattus norvegicus Exposure Spermatogenesis,
Spermatozoa
Spermatozoa Male Adult (F1),
Adult (F2)
Anti-H3 DNA methylation,
epigenetics,
inheritance,
sperm,
spermatogenesis,
transgenerational
Ben Maamar et al. 2018, Environ Epigenet 29732173 Epigenome MeDIP-Seq Rattus norvegicus Exposure Spermatogenesis,
Spermatozoa
Spermatozoa Male Adult (F1),
Adult (F2),
Adult (F3)
Anti-5mC DNA methylation,
epigenetics,
inheritance,
sperm,
spermatogenesis,
transgenerational
Ben Maamar et al. 2018, Sci Rep 29593303 Epigenome ChIP-Seq Rattus norvegicus Exposure Spermatogenesis,
Spermatozoa
Spermatozoa Male Adult (F3),
Adult
Anti-H3,
Anti-H3K27me3
Bernstein et al. 2010, Nat. Biotechnol. 20944595 Epigenome MeDIP-Seq Rattus norvegicus Normal Tissue profiling Spermatozoa Male Adult Anti-5mC
Bernstein et al. 2010, Nat. Biotechnol. 20944595 Epigenome ChIP-Seq Homo sapiens Normal Tissue profiling Ovary Female Adult Anti-H3K27ac,
Anti-H3K27me3,
Anti-H3K36me3,
Anti-H3K4me1,
Anti-H3K4me3,
Anti-H3K9me3,
Input
Bernstein et al. 2010, Nat. Biotechnol. 20944595 Transcriptome RNA-Seq Homo sapiens Normal Tissue profiling Ovary,
Testis
Female,
Male
Fetal,
Adult

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